Browse of TCMCG007C41809 protein

CDS

Accession Number	TCMCG007C41809
gbkey	CDS
Protein Id	XP_009102452.2
Location	join(8188274..8188401,8188498..8188552,8188639..8188736,8188807..8190154,8190255..8190374,8190586..8190783,8191119..8191307,8191399..8191479,8191584..8191641,8191714..8192204,8192308..8192361,8192591..8192636,8192974..8193167,8193250..8193303,8193385..8193465,8193686..8193823,8193900..8194016,8194504..8194604,8194688..8194894,8195010..8195385,8195488..8197053)
Gene	LOC103828590
GeneID	103828590
Organism	Brassica rapa

Protein

Length	1899aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA249065
db_source	XM_009104204.3
Definition	chromatin modification-related protein EAF1 B isoform X2 [Brassica rapa]

EGGNOG-MAPPER Annotation

COG_category	K
Description	DNA binding
KEGG_TC	-
KEGG_Module	-
KEGG_Reaction	-
KEGG_rclass	-
BRITE	-
KEGG_ko	-
EC	-
KEGG_Pathway	-
GOs	GO:0000123        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005576        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005634        [VIEW IN EMBL-EBI] GO:0005654        [VIEW IN EMBL-EBI] GO:0006325        [VIEW IN EMBL-EBI] GO:0006464        [VIEW IN EMBL-EBI] GO:0006473        [VIEW IN EMBL-EBI] GO:0006475        [VIEW IN EMBL-EBI] GO:0006807        [VIEW IN EMBL-EBI] GO:0006996        [VIEW IN EMBL-EBI] GO:0008150        [VIEW IN EMBL-EBI] GO:0008152        [VIEW IN EMBL-EBI] GO:0009909        [VIEW IN EMBL-EBI] GO:0009987        [VIEW IN EMBL-EBI] GO:0016043        [VIEW IN EMBL-EBI] GO:0016569        [VIEW IN EMBL-EBI] GO:0016570        [VIEW IN EMBL-EBI] GO:0016573        [VIEW IN EMBL-EBI] GO:0018193        [VIEW IN EMBL-EBI] GO:0018205        [VIEW IN EMBL-EBI] GO:0018393        [VIEW IN EMBL-EBI] GO:0018394        [VIEW IN EMBL-EBI] GO:0019538        [VIEW IN EMBL-EBI] GO:0031248        [VIEW IN EMBL-EBI] GO:0031974        [VIEW IN EMBL-EBI] GO:0031981        [VIEW IN EMBL-EBI] GO:0032991        [VIEW IN EMBL-EBI] GO:0035267        [VIEW IN EMBL-EBI] GO:0036211        [VIEW IN EMBL-EBI] GO:0040034        [VIEW IN EMBL-EBI] GO:0043170        [VIEW IN EMBL-EBI] GO:0043189        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0043233        [VIEW IN EMBL-EBI] GO:0043412        [VIEW IN EMBL-EBI] GO:0043543        [VIEW IN EMBL-EBI] GO:0043967        [VIEW IN EMBL-EBI] GO:0043981        [VIEW IN EMBL-EBI] GO:0044237        [VIEW IN EMBL-EBI] GO:0044238        [VIEW IN EMBL-EBI] GO:0044260        [VIEW IN EMBL-EBI] GO:0044267        [VIEW IN EMBL-EBI] GO:0044422        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044428        [VIEW IN EMBL-EBI] GO:0044446        [VIEW IN EMBL-EBI] GO:0044451        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0048046        [VIEW IN EMBL-EBI] GO:0048506        [VIEW IN EMBL-EBI] GO:0048509        [VIEW IN EMBL-EBI] GO:0048510        [VIEW IN EMBL-EBI] GO:0048580        [VIEW IN EMBL-EBI] GO:0048583        [VIEW IN EMBL-EBI] GO:0048831        [VIEW IN EMBL-EBI] GO:0050789        [VIEW IN EMBL-EBI] GO:0050793        [VIEW IN EMBL-EBI] GO:0051239        [VIEW IN EMBL-EBI] GO:0051276        [VIEW IN EMBL-EBI] GO:0065007        [VIEW IN EMBL-EBI] GO:0070013        [VIEW IN EMBL-EBI] GO:0071704        [VIEW IN EMBL-EBI] GO:0071840        [VIEW IN EMBL-EBI] GO:1901564        [VIEW IN EMBL-EBI] GO:1902493        [VIEW IN EMBL-EBI] GO:1902494        [VIEW IN EMBL-EBI] GO:1902562        [VIEW IN EMBL-EBI] GO:1990234        [VIEW IN EMBL-EBI] GO:2000026        [VIEW IN EMBL-EBI] GO:2000028        [VIEW IN EMBL-EBI] GO:2000241        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGGATGGATATCTTCTAGTAAATGCTGAGCTTGATTCCATGGGAGGAGTTATTGATAGTGGAGGTGGTATTGCTCTCAAAACGTCTCCCCGCCGAACTGCAATTGAGAAGGCTCAAGCCGAGCTTAGGCAAGAGTATGATGTCCGTGAGGAAAGGAGGAGAGAACTAGAGTTTCTTGAGAAAGGAGGTAATCCCTTGGATTTTAAGTTTGGTATTGCAACTTCACATAGCGTCCAATCTACATCACTCACTGATCAGCAAGCAGAGCATTTTGTAAACAGTGGACTCAAGGATAGTTTTGCCCTGGCTTCCTCACCACATGGAGACTCTGTGGAGAGTAGTGGTAGACCCGCAGTTCCTACAGTTTCTGAACCCAATACAGCGGATAATCTTTTACTCTTTGATTCTGGAAATAAGTCAGTTGAGGGAGAAAACAATTTGAGATATCCTAACAGGCAACACAGAACGTCCGAGTCAGAACGGTCATACAAAGCGAACACCAACCAAAATATCAAAGAAACAGAGGATTCTGCTATCTTTCGACCGTATGCTCGTAGGAACAGAACAAAGATAAATCGGGATCCAGCACGGTCAAGTTCCACGGATTTAGTTCAGAATCGTGGTGGTCTTGCAACGTCTATCTCTGTCCGCAGAGGATCAGTGGACGGAAAGGTTTGCAATTCTGAAGCAGCCAATCAAAAGGATAGGCAAACAACCTCTGTATCATGTCCAGTATTTGCAAATTCAAATAGAACTGTTGTTCCGAAAAATGTAGCTCCCAGTAATACGCTGAATACTAAGGTGGATGGTGGACCTGTTGTGCGAGAGAGTGCTGCTGGATCGAAAACTAGTCTAGTATTGAAGGATGAAGCAGACATTACAGTTAGAAAAAAGTCCGCAGGTTTGCATCTTGAAGAGGCTGGGGAGAAGGCACAACTAGTTTTGACTAGTACACAGATTGGTTCTCCCAAAGCTGCAACAATAGCTGGCCAGGAAAATAATTCCACCCAAATGGATGAGCTAGGAGATTCTACAGGAGAAAAAAAGAGTTTAACAGATAGAGCAGCTGCAGGGACAGAGTCTTCTCATGCTAACCACTTAGAAGTAGATGTAGATACTGAAAGAGATCTTTATAGAGCGGACAAACTCGACTCAGATGAAATCTCTATGCCGAAGGCTTCAAGAGTAGAGGGGCTACTGAATCAAACAGTTGGTGAACTGAAGATTGAGGATGAGACAGGTCGATCTACCACCATAATTAGTGAGTGCAGTCCTGCGCGTGAAATTCTGATGAATTCAGTTAAAGTTGAAAATGAAAACTACAGAAGTGTGGCTGAGCTACAAAATGAAGAGGAATGTTCTGACACTGAGAAAAAGCTTCAACATGGGTTGGTTGTACCTGAAAATGATAAGAAAGTTAGTAGTGTTTTGGCTGACGATCCTAGTAGCTTTGTGCACCCTGGAAAACCTCAGGCATCTGTAGACGCAAGTTCATGCATGGTTGGCGATAATGTATTGTCAGGAACTGACGTTGAAGCATTAAAACATCAGCCTAGCTCAGATGATGGCTCAAAAGTGTTAGATACTGTGAAGGAAGACTCTCTCCTTGAGGAGGCACGAATTATACAGGCGAAGCGAAAAAGAATTGCCGAGTTATCCTGTGGTACCGCACCTGTGGAGGTCCGTGAGAAATGTCAATGGGATTTTGTCCTTGAAGAAATGGCATGGCTGGCAAATGATTTTGCTCAGGAGCGGCTTTGGAAGATGACTGCTGCTGCACAAATTTGCCATCGGGTTGCTTTGACTTCCCAGTTGAGATTTGAGGAAAAAAATCAGCACAGAAAGCTGAGAAATATAGCTTCAATCCTATCTAGTGCGATATTGAAATTCTGGAGTTCTGTGGAGGTTCCTGGGGAGCTGGAGGAGACAGGCTTGGGAATTGATAAGGAGACCTGCCAAGAATCTAATTGTGAGAGTGGCAGAAAATGTTTAGCCGTGGGTGTCAGGGAGTATGCACGTAGATTTTTGAAGTATAACAATTCTTCTATCCCTGATCATTCAGCTGCACCATCAACACCCGACTATATGTGCGACCCAGAAATATTGGATACAGCTCTGGTTGATCAGCTATCGGAAGAAAGCCTATTTTATTCAGTTCCAGCTGGTGCAATGAAGGTGTACCAAATATCCATTGAGACCCATCTCGCACGCTGTGAGAAGTTTGGAAATAGCATGAAGGAGGAGGTTGATACATCAGCCTATGATGCTGTTGGAGATTCAGATTACGATGTTACTGCATTTGATGAGGATGAAGTAGAAACGAGTACCTATTATCTCCCTGGAGCTTTGGAATGCAGCAAATCATTTAAGTTGAGCCACAAAAAAAGGAAGAATTTGATGAAGTCGCATTCTGCCCGGTCATATGATCTTGGAGCTGATTCACCGTACATGAACTACACAGATGGGTTTAACTCATCGAATTTGATGGCGAAAAGGGCTGCTAATAATATAAATGTCGGCTCAGTTCCTACGAGGCGTGTGCGCACTGCTTCCAGGCCGAGGATTGTGAGTTTACCAGTGCCCTCAAAGACAGATGCATCTAGTGGGGATACTAGTTCTTTTCATGATGAGCAAAGTAGTTTGCATGGTGGATCGGCAGTTCAAAAAGGCACAGAGGTTGAATCAAGTGGTAATTTTGAGAAGCAGTTATCCTATGACATGGCTGAAACTTCAGGGAAACCTAAAAAGAAGAAGAAGACTCATCTGGGATCTGCTTATGACCAAACCTGGCATCCCGATTCATCAGTCCATGCTGAACAGAAGGACCACTGGAAGAAGCGAGTAGAGAATCATTTCGATATGAATGGTATATATGGTCCTCATGCAAAGAAGCAAAAGACCACCAAGCAATTGGTAGAGAATAATTTTGATGGTGCTATTGCTCTCACTGGATCAATTCCTTCTCCGGCAGCTTCCCAAATGAGCAATATGTCCAACCCCAACAAATCTATCAAATTTATTGGAGGTCGTGATAGGGCCAGAAAAATAAAAGGCCTAAAGATTTCTCCTGGCGAGCATGGTTCTGGAACTACGTGGTCACTATTTGAGGATCAGGCGCTCGTTGTCCTGGTGCATGACATGGGCCCTAACTGGGAGCTCATTAGTGATGCAATGAACAGCACTCTTAAAATTAAGTGTATATATCGTAATCCGAGTGAATGCAAGGAGCGGCATAAAATTCTGATGGATAAGACTGCGAGTGATGGGGCTGATAGTGCTGAAGACTCAGGGACTTCTCAGTCTTATCCATCCACTTTGCCTGGCATCCCGAAGGGAAGTGCAAGACAGTTGTTTCAGCGACTGCAAGGGCCAATGGAGGAAGATACCCTGAAGTCCCATTTTGAGAAGATTTGTTTGATTGGGAAGAAGTTACACTATAGAAAGTCACAGAATGATGGTCGGGATCCCAAGCAGATAGTACCAGTTCACAATTCACAAGTCATGGCTCTTTCTCAAGTATTCCCTAATAATCTGAATGGAGGTGTTCTAACGCCCCTTGATCTCTGTGATGCGTCAACTTCAGGTCAAGATTTATTTTCACTTGAAAATCCAGGTTCGCATCTGGGTCTTCCAATGTTGAATCAAGGGACGCCAGTGCTACCTACTTCTGGACCAAACCCATCCACTCCTGGATCATCTGGTGTGGTTCCCGGCAACAGTTTACCAACCACACTTGGTTTGCACCATTCTTCTGCAAGGGATGGTAGATTCAACGTTTCCAGAGGGCCTTTGCCACTTGATGAACAACATCGACTCCAACAGTCTAATCAGATGTCACCCAGTAGAAACCTGCAGCAGCCTTCTTCATCAACTCCTGGAGCTATCTCAGGATCTGGACACCGCATGGTTCCTGGTGCAAACACCATGGGTGTAAGTGGACTGAACAGAGGAGCACCCATGTCGAGGCCTGGTTTTCAAGCAATTGGCTCAGCAGCAATGCCAAATACTGGTAGCATGCTGTCATCTGGTATGGTGGGAATTCCAAAAACTGGTAATATTCACTCTGGAGGAGGAGCTTCTCAAGGAAACCCCATGTCTAGGCCGCCTCGTGAAGCTGTTCAGCATATGATGCGGATGCAGGCTGCTCAAGGGAACAGCCAGGGGATCCCAGCTTTCGGTAGTTTGAGTTCTGGATTTACCAACAACCAGACAACTCCTGTTCCGGCGTACCCAGGCCATCTTTCTCAGCAGCATCAGATGCCACATCAGTCGCATGTGCTTGGCAATTCGCAGCATCCTCATCTCCAGAGCCCAAGCCCAAGTCATGCCACTAGGGCACAGCAGGACGGATTTGCTCTCCGTCAAAGGCTAATGCACCAGAGGTTTGTGCAGCAGCAGCAGCAGTTTGCATCATCCGGCACTATGATGCCACATGGACAACAACAACAACAACCTCAGGGGACTTCTGTTTCTTCTTCGACACAAAACAATCAACAGACTCAACCACCCGTTTCGCCCCAGCCATTACCGCCCCCAGTGTCGACCTCTCCTAATACTAATGCTTTGACACAACAAAACCCTCAAAAATCTCAGTTACCGCTTCATGGCCTGGCTAGGAATCCTCAGTCTGGTGCTCCTGGAGTAAACAATCAATTTGGAAAACAACGGCAGAGACAACTCCAGCAGCAGTCTGGAAGACAACACCCACACCAGCGGCAGCCATCACAAGGTCAACAGCAGAATAAACAATCCAAGGGGGCGGGTAGAGGAAACATGGTTCATCAGAACATTACTCTTGATCAGTCACACTTGAATGGTCTCACCATGTCCCCCGGAAATCAGGCTACCGAAAAAGGAGAGGCAATGGTTGCAGTTAGGCCTGATAGGGAGTCTAATGTGGGGACTGCCACGAGCACGCATCTTCCGTCTAAACCTTTTGTTTCACCAGAGTCCTCAAATCATTCACAGCAATTGCCGAAATCATTTTCTGGAGCTACATCTTCGTCTCAAGAACAACAGATACAGTTACCTTCAGACAATAGGATCCAAGGCCAGAGCTCACCTGCGGCCTCATGCAACATCTTGTCCACCTCTAGCCCCTCAGTTGGACCTTCCAACCCTCAGCATTTGTTGCTACACCAAAAGCAGCGTAATCAAGTGCAAGCTCAGCGAATTGCTCATCAGAATCATATTGAGAACTCTGACTTATCGAGAAAATCCCAAGCTGAACGTGTGCCACGCGTTCAGCAGTCTGTCCCCAATACCACACAAACAGCTAGTATGAGTACGAGCAAGGGTATGCCTCAAGTGACTAATGATTCGAACAACATAAAAGCAGTTGGTTCTACTGTTGTGCCTTCTCCAAATGGATTGGAACCTCCAGCTAGTGCCGCCTCTGTGCAAAGCGCTGCTCCTAATGTAGTAAACAGTTCTAATACAGACTCAGCTGGTAGTGATCCAGTAACAACACTGAAGCAAGGACTGGCACCTAAGCATTTCCCTGGGGGCTTGCCTTGTCAGGAGCTCAAGGGCCCGATAGAGAGACAAGAATCTCTACCAACAGTAGAAAAGAGACCAAAGTTGCCAGAGCAGCTGACTGTACAAAATCAGAAACGTCTTGCTTCTGATCAGCAGTCTCCACAAATAGAAGAAGCACAAGAACTATCATCTCCCAAGCCTCCCGATACAAAAGTGGAGTGA

Protein:   MDGYLLVNAELDSMGGVIDSGGGIALKTSPRRTAIEKAQAELRQEYDVREERRRELEFLEKGGNPLDFKFGIATSHSVQSTSLTDQQAEHFVNSGLKDSFALASSPHGDSVESSGRPAVPTVSEPNTADNLLLFDSGNKSVEGENNLRYPNRQHRTSESERSYKANTNQNIKETEDSAIFRPYARRNRTKINRDPARSSSTDLVQNRGGLATSISVRRGSVDGKVCNSEAANQKDRQTTSVSCPVFANSNRTVVPKNVAPSNTLNTKVDGGPVVRESAAGSKTSLVLKDEADITVRKKSAGLHLEEAGEKAQLVLTSTQIGSPKAATIAGQENNSTQMDELGDSTGEKKSLTDRAAAGTESSHANHLEVDVDTERDLYRADKLDSDEISMPKASRVEGLLNQTVGELKIEDETGRSTTIISECSPAREILMNSVKVENENYRSVAELQNEEECSDTEKKLQHGLVVPENDKKVSSVLADDPSSFVHPGKPQASVDASSCMVGDNVLSGTDVEALKHQPSSDDGSKVLDTVKEDSLLEEARIIQAKRKRIAELSCGTAPVEVREKCQWDFVLEEMAWLANDFAQERLWKMTAAAQICHRVALTSQLRFEEKNQHRKLRNIASILSSAILKFWSSVEVPGELEETGLGIDKETCQESNCESGRKCLAVGVREYARRFLKYNNSSIPDHSAAPSTPDYMCDPEILDTALVDQLSEESLFYSVPAGAMKVYQISIETHLARCEKFGNSMKEEVDTSAYDAVGDSDYDVTAFDEDEVETSTYYLPGALECSKSFKLSHKKRKNLMKSHSARSYDLGADSPYMNYTDGFNSSNLMAKRAANNINVGSVPTRRVRTASRPRIVSLPVPSKTDASSGDTSSFHDEQSSLHGGSAVQKGTEVESSGNFEKQLSYDMAETSGKPKKKKKTHLGSAYDQTWHPDSSVHAEQKDHWKKRVENHFDMNGIYGPHAKKQKTTKQLVENNFDGAIALTGSIPSPAASQMSNMSNPNKSIKFIGGRDRARKIKGLKISPGEHGSGTTWSLFEDQALVVLVHDMGPNWELISDAMNSTLKIKCIYRNPSECKERHKILMDKTASDGADSAEDSGTSQSYPSTLPGIPKGSARQLFQRLQGPMEEDTLKSHFEKICLIGKKLHYRKSQNDGRDPKQIVPVHNSQVMALSQVFPNNLNGGVLTPLDLCDASTSGQDLFSLENPGSHLGLPMLNQGTPVLPTSGPNPSTPGSSGVVPGNSLPTTLGLHHSSARDGRFNVSRGPLPLDEQHRLQQSNQMSPSRNLQQPSSSTPGAISGSGHRMVPGANTMGVSGLNRGAPMSRPGFQAIGSAAMPNTGSMLSSGMVGIPKTGNIHSGGGASQGNPMSRPPREAVQHMMRMQAAQGNSQGIPAFGSLSSGFTNNQTTPVPAYPGHLSQQHQMPHQSHVLGNSQHPHLQSPSPSHATRAQQDGFALRQRLMHQRFVQQQQQFASSGTMMPHGQQQQQPQGTSVSSSTQNNQQTQPPVSPQPLPPPVSTSPNTNALTQQNPQKSQLPLHGLARNPQSGAPGVNNQFGKQRQRQLQQQSGRQHPHQRQPSQGQQQNKQSKGAGRGNMVHQNITLDQSHLNGLTMSPGNQATEKGEAMVAVRPDRESNVGTATSTHLPSKPFVSPESSNHSQQLPKSFSGATSSSQEQQIQLPSDNRIQGQSSPAASCNILSTSSPSVGPSNPQHLLLHQKQRNQVQAQRIAHQNHIENSDLSRKSQAERVPRVQQSVPNTTQTASMSTSKGMPQVTNDSNNIKAVGSTVVPSPNGLEPPASAASVQSAAPNVVNSSNTDSAGSDPVTTLKQGLAPKHFPGGLPCQELKGPIERQESLPTVEKRPKLPEQLTVQNQKRLASDQQSPQIEEAQELSSPKPPDTKVE